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How to apply AD9528 Settings from Filter Wizard in FPGA OS


I have an ADRV9371 connected to an Alter/Intel FPGA running Linux OS solution. We found that with the default settings (TX rate 245.76Msps, RX 122.88Msps), the data streaming is not keeping up. Anything we tried to run the board with with a lower IQ sampling rate, it didn't work. When the Filter wizard suggests device clock something other than default, I guess the AD9528 needs to be programmed accordingly as well. Filter wizard generates a profile for it. The question is how do we apply it in OS?

Any other help regarding running the board with a lower IQ sampling rate would be appreciated.